Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1P40201 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1P40201 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1P40201 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1P40201 AC137842.1-201ENSMUST00000227896 2064 ntBASIC18.73■□□□□ 0.59
Chd1P40201 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1P40201 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1P40201 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC18.73■□□□□ 0.59
Chd1P40201 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC18.73■□□□□ 0.59
Chd1P40201 Gm5700-201ENSMUST00000191483 989 ntBASIC18.73■□□□□ 0.59
Chd1P40201 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Chd1P40201 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC18.73■□□□□ 0.59
Chd1P40201 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC18.73■□□□□ 0.59
Chd1P40201 n-R5s185-201ENSMUST00000083953 119 ntBASIC18.73■□□□□ 0.59
Chd1P40201 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1P40201 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1P40201 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC18.73■□□□□ 0.59
Chd1P40201 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1P40201 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1P40201 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1P40201 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1P40201 Gm6831-202ENSMUST00000213025 1673 ntBASIC18.72■□□□□ 0.59
Chd1P40201 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1P40201 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC18.72■□□□□ 0.59
Chd1P40201 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1P40201 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1P40201 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Chd1P40201 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1P40201 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC18.72■□□□□ 0.59
Chd1P40201 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC18.72■□□□□ 0.59
Chd1P40201 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1P40201 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1P40201 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1P40201 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Chd1P40201 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1P40201 Gm10728-201ENSMUST00000194292 1829 ntBASIC18.72■□□□□ 0.59
Chd1P40201 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Chd1P40201 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1P40201 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
Chd1P40201 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1P40201 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1P40201 Gm14760-201ENSMUST00000121831 999 ntBASIC18.71■□□□□ 0.59
Chd1P40201 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Chd1P40201 Gm24248-201ENSMUST00000157321 322 ntBASIC18.71■□□□□ 0.59
Chd1P40201 Gm26368-201ENSMUST00000157826 118 ntBASIC18.71■□□□□ 0.59
Chd1P40201 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Chd1P40201 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC18.71■□□□□ 0.59
Chd1P40201 Gm9884-201ENSMUST00000194343 1222 ntBASIC18.71■□□□□ 0.59
Chd1P40201 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Chd1P40201 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1P40201 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Chd1P40201 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1P40201 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Chd1P40201 Gm43334-201ENSMUST00000197740 1318 ntBASIC18.71■□□□□ 0.59
Chd1P40201 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1P40201 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1P40201 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Chd1P40201 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
Chd1P40201 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1P40201 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1P40201 Gm44401-201ENSMUST00000204462 2375 ntBASIC18.71■□□□□ 0.59
Chd1P40201 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1P40201 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1P40201 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1P40201 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1P40201 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC18.71■□□□□ 0.59
Chd1P40201 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC18.71■□□□□ 0.59
Chd1P40201 Gm12906-201ENSMUST00000154610 441 ntBASIC18.71■□□□□ 0.59
Chd1P40201 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
Chd1P40201 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC18.71■□□□□ 0.59
Chd1P40201 AC154305.4-201ENSMUST00000224520 614 ntBASIC18.71■□□□□ 0.59
Chd1P40201 AC093022.5-201ENSMUST00000226841 1079 ntBASIC18.71■□□□□ 0.59
Chd1P40201 AC130477.1-201ENSMUST00000226982 420 ntBASIC18.71■□□□□ 0.59
Chd1P40201 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Chd1P40201 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1P40201 Gm18294-201ENSMUST00000176980 1748 ntBASIC18.71■□□□□ 0.59
Chd1P40201 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Chd1P40201 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Chd1P40201 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Chd1P40201 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1P40201 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1P40201 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1P40201 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Chd1P40201 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Chd1P40201 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1P40201 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1P40201 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Chd1P40201 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1P40201 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC18.7■□□□□ 0.58
Chd1P40201 Gm15004-201ENSMUST00000119192 630 ntBASIC18.7■□□□□ 0.58
Chd1P40201 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Chd1P40201 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1P40201 Gm9135-201ENSMUST00000182963 990 ntBASIC18.7■□□□□ 0.58
Chd1P40201 Gm45113-201ENSMUST00000207518 165 ntBASIC18.7■□□□□ 0.58
Chd1P40201 Olfr584-201ENSMUST00000098210 964 ntBASIC18.7■□□□□ 0.58
Chd1P40201 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1P40201 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1P40201 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1P40201 Gm21759-201ENSMUST00000178345 1828 ntBASIC18.7■□□□□ 0.58
Chd1P40201 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms