Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.9□□□□□ -0.34
Fen1P39749 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.9□□□□□ -0.34
Fen1P39749 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.9□□□□□ -0.34
Fen1P39749 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Fen1P39749 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Fen1P39749 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.9□□□□□ -0.34
Fen1P39749 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.9□□□□□ -0.34
Fen1P39749 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.9□□□□□ -0.34
Fen1P39749 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Fen1P39749 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Fen1P39749 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.9□□□□□ -0.34
Fen1P39749 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Gm5161-201ENSMUST00000075243 853 ntBASIC12.9□□□□□ -0.34
Fen1P39749 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.9□□□□□ -0.34
Fen1P39749 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.9□□□□□ -0.34
Fen1P39749 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.9□□□□□ -0.34
Fen1P39749 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Fen1P39749 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Fen1P39749 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Fen1P39749 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Fen1P39749 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.89□□□□□ -0.35
Fen1P39749 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
Fen1P39749 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Fen1P39749 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.89□□□□□ -0.35
Fen1P39749 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Fen1P39749 Gm5745-201ENSMUST00000183748 313 ntBASIC12.89□□□□□ -0.35
Fen1P39749 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.89□□□□□ -0.35
Fen1P39749 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.89□□□□□ -0.35
Fen1P39749 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Gm24447-201ENSMUST00000083977 338 ntBASIC12.89□□□□□ -0.35
Fen1P39749 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Fen1P39749 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.89□□□□□ -0.35
Fen1P39749 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.89□□□□□ -0.35
Fen1P39749 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Fen1P39749 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fen1P39749 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fen1P39749 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fen1P39749 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Fen1P39749 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fen1P39749 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fen1P39749 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fen1P39749 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fen1P39749 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fen1P39749 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Fen1P39749 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fen1P39749 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fen1P39749 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fen1P39749 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Fen1P39749 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms