Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rfc1P35601 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfc1P35601 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfc1P35601 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfc1P35601 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfc1P35601 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfc1P35601 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rfc1P35601 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfc1P35601 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfc1P35601 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfc1P35601 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rfc1P35601 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Rfc1P35601 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.5□□□□□ -0.25
Rfc1P35601 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rfc1P35601 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Rfc1P35601 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.5□□□□□ -0.25
Rfc1P35601 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.5□□□□□ -0.25
Rfc1P35601 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.5□□□□□ -0.25
Rfc1P35601 Gm10766-202ENSMUST00000194123 606 ntBASIC13.5□□□□□ -0.25
Rfc1P35601 Gm44124-201ENSMUST00000204159 472 ntBASIC13.5□□□□□ -0.25
Rfc1P35601 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.5□□□□□ -0.25
Rfc1P35601 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Rfc1P35601 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rfc1P35601 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Rfc1P35601 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rfc1P35601 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rfc1P35601 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.49□□□□□ -0.25
Rfc1P35601 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.49□□□□□ -0.25
Rfc1P35601 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rfc1P35601 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Gm12585-201ENSMUST00000117307 290 ntBASIC13.49□□□□□ -0.25
Rfc1P35601 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Gm25927-201ENSMUST00000175058 117 ntBASIC13.49□□□□□ -0.25
Rfc1P35601 Gm7775-201ENSMUST00000218871 853 ntBASIC13.49□□□□□ -0.25
Rfc1P35601 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.49□□□□□ -0.25
Rfc1P35601 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.49□□□□□ -0.25
Rfc1P35601 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.49□□□□□ -0.25
Rfc1P35601 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.49□□□□□ -0.25
Rfc1P35601 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rfc1P35601 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Rfc1P35601 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rfc1P35601 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rfc1P35601 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.49□□□□□ -0.25
Rfc1P35601 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.49□□□□□ -0.25
Rfc1P35601 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfc1P35601 Gm36957-201ENSMUST00000192982 2824 ntBASIC13.49□□□□□ -0.25
Rfc1P35601 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.48□□□□□ -0.25
Rfc1P35601 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfc1P35601 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms