Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.84□□□□□ -0.51
Foxa1P35582 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.84□□□□□ -0.51
Foxa1P35582 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.84□□□□□ -0.51
Foxa1P35582 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.84□□□□□ -0.51
Foxa1P35582 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Foxa1P35582 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.84□□□□□ -0.51
Foxa1P35582 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Foxa1P35582 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Foxa1P35582 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Foxa1P35582 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Foxa1P35582 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.83□□□□□ -0.51
Foxa1P35582 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Foxa1P35582 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.83□□□□□ -0.52
Foxa1P35582 Gm14921-201ENSMUST00000118643 908 ntBASIC11.83□□□□□ -0.52
Foxa1P35582 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.83□□□□□ -0.52
Foxa1P35582 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Gm25927-201ENSMUST00000175058 117 ntBASIC11.83□□□□□ -0.52
Foxa1P35582 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.83□□□□□ -0.52
Foxa1P35582 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Foxa1P35582 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.83□□□□□ -0.52
Foxa1P35582 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.83□□□□□ -0.52
Foxa1P35582 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.83□□□□□ -0.52
Foxa1P35582 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.83□□□□□ -0.52
Foxa1P35582 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Foxa1P35582 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.83□□□□□ -0.52
Foxa1P35582 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.83□□□□□ -0.52
Foxa1P35582 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.83□□□□□ -0.52
Foxa1P35582 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Foxa1P35582 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Foxa1P35582 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.82□□□□□ -0.52
Foxa1P35582 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.82□□□□□ -0.52
Foxa1P35582 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Foxa1P35582 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Foxa1P35582 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Foxa1P35582 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.82□□□□□ -0.52
Foxa1P35582 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.82□□□□□ -0.52
Foxa1P35582 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Foxa1P35582 Snora78-201ENSMUST00000158630 128 ntBASIC11.82□□□□□ -0.52
Foxa1P35582 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Gm6222-202ENSMUST00000182143 629 ntBASIC11.82□□□□□ -0.52
Foxa1P35582 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.82□□□□□ -0.52
Foxa1P35582 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.82□□□□□ -0.52
Foxa1P35582 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.82□□□□□ -0.52
Foxa1P35582 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.82□□□□□ -0.52
Foxa1P35582 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Foxa1P35582 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Foxa1P35582 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Foxa1P35582 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Foxa1P35582 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms