Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm9062-201ENSMUST00000117712 727 ntBASIC11.81□□□□□ -0.52
Sftpa1P35242 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.81□□□□□ -0.52
Sftpa1P35242 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.81□□□□□ -0.52
Sftpa1P35242 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.81□□□□□ -0.52
Sftpa1P35242 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sftpa1P35242 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.81□□□□□ -0.52
Sftpa1P35242 Gm44545-201ENSMUST00000208262 746 ntBASIC11.81□□□□□ -0.52
Sftpa1P35242 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.81□□□□□ -0.52
Sftpa1P35242 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.81□□□□□ -0.52
Sftpa1P35242 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sftpa1P35242 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.81□□□□□ -0.52
Sftpa1P35242 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.81□□□□□ -0.52
Sftpa1P35242 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sftpa1P35242 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.8□□□□□ -0.52
Sftpa1P35242 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.8□□□□□ -0.52
Sftpa1P35242 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sftpa1P35242 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sftpa1P35242 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sftpa1P35242 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sftpa1P35242 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.8□□□□□ -0.52
Sftpa1P35242 Gm12266-201ENSMUST00000120311 962 ntBASIC11.8□□□□□ -0.52
Sftpa1P35242 Gm14832-201ENSMUST00000121289 322 ntBASIC11.8□□□□□ -0.52
Sftpa1P35242 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.8□□□□□ -0.52
Sftpa1P35242 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.8□□□□□ -0.52
Sftpa1P35242 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.8□□□□□ -0.52
Sftpa1P35242 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sftpa1P35242 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Sftpa1P35242 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.8□□□□□ -0.52
Sftpa1P35242 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sftpa1P35242 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Sftpa1P35242 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sftpa1P35242 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.8□□□□□ -0.52
Sftpa1P35242 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Sftpa1P35242 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sftpa1P35242 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.79□□□□□ -0.52
Sftpa1P35242 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.79□□□□□ -0.52
Sftpa1P35242 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sftpa1P35242 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sftpa1P35242 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Gm14999-201ENSMUST00000121039 624 ntBASIC11.79□□□□□ -0.52
Sftpa1P35242 Gm11597-201ENSMUST00000121423 964 ntBASIC11.79□□□□□ -0.52
Sftpa1P35242 Gm14665-201ENSMUST00000122294 557 ntBASIC11.79□□□□□ -0.52
Sftpa1P35242 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.79□□□□□ -0.52
Sftpa1P35242 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms