Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.86□□□□□ -0.51
Cd40lgP27548 Gm37922-201ENSMUST00000195596 455 ntBASIC11.86□□□□□ -0.51
Cd40lgP27548 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.86□□□□□ -0.51
Cd40lgP27548 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.86□□□□□ -0.51
Cd40lgP27548 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cd40lgP27548 Gm7561-201ENSMUST00000211203 886 ntBASIC11.86□□□□□ -0.51
Cd40lgP27548 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cd40lgP27548 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.86□□□□□ -0.51
Cd40lgP27548 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.86□□□□□ -0.51
Cd40lgP27548 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.86□□□□□ -0.51
Cd40lgP27548 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Cd40lgP27548 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cd40lgP27548 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.86□□□□□ -0.51
Cd40lgP27548 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.86□□□□□ -0.51
Cd40lgP27548 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cd40lgP27548 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cd40lgP27548 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.85□□□□□ -0.51
Cd40lgP27548 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cd40lgP27548 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Cd40lgP27548 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.85□□□□□ -0.51
Cd40lgP27548 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.85□□□□□ -0.51
Cd40lgP27548 Mir1982-201ENSMUST00000157368 74 ntBASIC11.85□□□□□ -0.51
Cd40lgP27548 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.85□□□□□ -0.51
Cd40lgP27548 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.85□□□□□ -0.51
Cd40lgP27548 Gm40466-201ENSMUST00000212174 422 ntBASIC11.85□□□□□ -0.51
Cd40lgP27548 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cd40lgP27548 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.85□□□□□ -0.51
Cd40lgP27548 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.85□□□□□ -0.51
Cd40lgP27548 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cd40lgP27548 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.84□□□□□ -0.51
Cd40lgP27548 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.84□□□□□ -0.51
Cd40lgP27548 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.84□□□□□ -0.51
Cd40lgP27548 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.84□□□□□ -0.51
Cd40lgP27548 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.84□□□□□ -0.51
Cd40lgP27548 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.84□□□□□ -0.51
Cd40lgP27548 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Cd40lgP27548 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cd40lgP27548 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd40lgP27548 Proscos-202ENSMUST00000178990 666 ntBASIC11.84□□□□□ -0.51
Cd40lgP27548 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cd40lgP27548 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.84□□□□□ -0.51
Cd40lgP27548 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.84□□□□□ -0.51
Cd40lgP27548 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.84□□□□□ -0.51
Cd40lgP27548 Gm44069-201ENSMUST00000204898 506 ntBASIC11.84□□□□□ -0.51
Cd40lgP27548 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Cd40lgP27548 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.84□□□□□ -0.51
Cd40lgP27548 Gm6458-201ENSMUST00000211573 635 ntBASIC11.84□□□□□ -0.51
Cd40lgP27548 Gm29705-201ENSMUST00000212598 474 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms