Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col8a2P25318 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.67□□□□□ -0.7
Col8a2P25318 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Col8a2P25318 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Col8a2P25318 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.67□□□□□ -0.7
Col8a2P25318 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Col8a2P25318 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Col8a2P25318 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Col8a2P25318 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Mir874-201ENSMUST00000104769 76 ntBASIC10.67□□□□□ -0.7
Col8a2P25318 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.67□□□□□ -0.7
Col8a2P25318 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Col8a2P25318 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.67□□□□□ -0.7
Col8a2P25318 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Col8a2P25318 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Col8a2P25318 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.67□□□□□ -0.7
Col8a2P25318 Gm38341-201ENSMUST00000195357 515 ntBASIC10.67□□□□□ -0.7
Col8a2P25318 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.67□□□□□ -0.7
Col8a2P25318 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.67□□□□□ -0.7
Col8a2P25318 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.67□□□□□ -0.7
Col8a2P25318 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Col8a2P25318 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Col8a2P25318 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Col8a2P25318 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col8a2P25318 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Col8a2P25318 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.66□□□□□ -0.7
Col8a2P25318 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Col8a2P25318 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Col8a2P25318 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Col8a2P25318 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Col8a2P25318 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Col8a2P25318 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Col8a2P25318 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Col8a2P25318 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Col8a2P25318 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.66□□□□□ -0.7
Col8a2P25318 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Col8a2P25318 Gm23363-201ENSMUST00000175024 79 ntBASIC10.66□□□□□ -0.7
Col8a2P25318 Mospd4-201ENSMUST00000180618 576 ntBASIC10.66□□□□□ -0.7
Col8a2P25318 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.66□□□□□ -0.7
Col8a2P25318 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Col8a2P25318 Gm37489-201ENSMUST00000191883 159 ntBASIC10.66□□□□□ -0.7
Col8a2P25318 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.66□□□□□ -0.7
Col8a2P25318 Gm7783-201ENSMUST00000204795 781 ntBASIC10.66□□□□□ -0.7
Col8a2P25318 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.66□□□□□ -0.7
Col8a2P25318 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.66□□□□□ -0.7
Col8a2P25318 Gm7046-201ENSMUST00000221351 977 ntBASIC10.66□□□□□ -0.7
Col8a2P25318 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Col8a2P25318 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.66□□□□□ -0.7
Col8a2P25318 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col8a2P25318 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms