Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.64□□□□□ -0.55
Cbx3P23198 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.64□□□□□ -0.55
Cbx3P23198 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.64□□□□□ -0.55
Cbx3P23198 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.64□□□□□ -0.55
Cbx3P23198 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Cbx3P23198 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.64□□□□□ -0.55
Cbx3P23198 Rprl2-201ENSMUST00000157150 290 ntBASIC11.64□□□□□ -0.55
Cbx3P23198 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.64□□□□□ -0.55
Cbx3P23198 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.64□□□□□ -0.55
Cbx3P23198 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.64□□□□□ -0.55
Cbx3P23198 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cbx3P23198 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.64□□□□□ -0.55
Cbx3P23198 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.64□□□□□ -0.55
Cbx3P23198 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.64□□□□□ -0.55
Cbx3P23198 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cbx3P23198 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cbx3P23198 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.63□□□□□ -0.55
Cbx3P23198 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cbx3P23198 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.63□□□□□ -0.55
Cbx3P23198 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.63□□□□□ -0.55
Cbx3P23198 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.63□□□□□ -0.55
Cbx3P23198 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.63□□□□□ -0.55
Cbx3P23198 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.63□□□□□ -0.55
Cbx3P23198 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cbx3P23198 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.63□□□□□ -0.55
Cbx3P23198 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Cbx3P23198 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.63□□□□□ -0.55
Cbx3P23198 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cbx3P23198 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cbx3P23198 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cbx3P23198 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.62□□□□□ -0.55
Cbx3P23198 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cbx3P23198 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cbx3P23198 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cbx3P23198 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cbx3P23198 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cbx3P23198 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.62□□□□□ -0.55
Cbx3P23198 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cbx3P23198 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Cbx3P23198 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.62□□□□□ -0.55
Cbx3P23198 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cbx3P23198 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cbx3P23198 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cbx3P23198 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cbx3P23198 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cbx3P23198 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.62□□□□□ -0.55
Cbx3P23198 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cbx3P23198 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cbx3P23198 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cbx3P23198 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cbx3P23198 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.62□□□□□ -0.55
Cbx3P23198 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.62□□□□□ -0.55
Cbx3P23198 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.62□□□□□ -0.55
Cbx3P23198 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cbx3P23198 Gm18057-201ENSMUST00000208220 503 ntBASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms