Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.02□□□□□ -0.49
Clk1P22518 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.02□□□□□ -0.49
Clk1P22518 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.02□□□□□ -0.49
Clk1P22518 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Clk1P22518 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Clk1P22518 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.02□□□□□ -0.49
Clk1P22518 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.02□□□□□ -0.49
Clk1P22518 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Clk1P22518 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.02□□□□□ -0.49
Clk1P22518 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.02□□□□□ -0.49
Clk1P22518 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.02□□□□□ -0.49
Clk1P22518 Gm7287-201ENSMUST00000205267 602 ntBASIC12.02□□□□□ -0.49
Clk1P22518 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.02□□□□□ -0.49
Clk1P22518 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.02□□□□□ -0.49
Clk1P22518 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Clk1P22518 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clk1P22518 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Clk1P22518 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Clk1P22518 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC12.01□□□□□ -0.49
Clk1P22518 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Clk1P22518 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Clk1P22518 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Gm23984-201ENSMUST00000157139 203 ntBASIC12.01□□□□□ -0.49
Clk1P22518 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.01□□□□□ -0.49
Clk1P22518 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.01□□□□□ -0.49
Clk1P22518 Gm6745-201ENSMUST00000199216 526 ntBASIC12.01□□□□□ -0.49
Clk1P22518 Gm9908-201ENSMUST00000211534 448 ntBASIC12.01□□□□□ -0.49
Clk1P22518 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Clk1P22518 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.01□□□□□ -0.49
Clk1P22518 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.01□□□□□ -0.49
Clk1P22518 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Clk1P22518 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.01□□□□□ -0.49
Clk1P22518 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.01□□□□□ -0.49
Clk1P22518 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clk1P22518 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Clk1P22518 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12□□□□□ -0.49
Clk1P22518 Gm28386-201ENSMUST00000189147 1849 ntBASIC12□□□□□ -0.49
Clk1P22518 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Clk1P22518 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Clk1P22518 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Clk1P22518 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12□□□□□ -0.49
Clk1P22518 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Clk1P22518 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Mir692-1-201ENSMUST00000102263 109 ntBASIC12□□□□□ -0.49
Clk1P22518 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12□□□□□ -0.49
Clk1P22518 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Gm13612-201ENSMUST00000119276 390 ntBASIC12□□□□□ -0.49
Clk1P22518 Gm15806-201ENSMUST00000120696 955 ntBASIC12□□□□□ -0.49
Clk1P22518 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12□□□□□ -0.49
Clk1P22518 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12□□□□□ -0.49
Clk1P22518 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12□□□□□ -0.49
Clk1P22518 Gm9794-201ENSMUST00000202370 423 ntBASIC12□□□□□ -0.49
Clk1P22518 Gm45384-201ENSMUST00000210451 277 ntBASIC12□□□□□ -0.49
Clk1P22518 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12□□□□□ -0.49
Clk1P22518 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms