Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VimP20152 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VimP20152 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VimP20152 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
VimP20152 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VimP20152 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VimP20152 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.98□□□□□ -0.33
VimP20152 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
VimP20152 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
VimP20152 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VimP20152 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VimP20152 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.97□□□□□ -0.33
VimP20152 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
VimP20152 Gm12428-201ENSMUST00000119844 727 ntBASIC12.97□□□□□ -0.33
VimP20152 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.97□□□□□ -0.33
VimP20152 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.97□□□□□ -0.33
VimP20152 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.97□□□□□ -0.33
VimP20152 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.97□□□□□ -0.33
VimP20152 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.97□□□□□ -0.33
VimP20152 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
VimP20152 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.97□□□□□ -0.33
VimP20152 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VimP20152 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
VimP20152 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VimP20152 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.96□□□□□ -0.33
VimP20152 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.96□□□□□ -0.33
VimP20152 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.96□□□□□ -0.33
VimP20152 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
VimP20152 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.96□□□□□ -0.33
VimP20152 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
VimP20152 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
VimP20152 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
VimP20152 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.96□□□□□ -0.33
VimP20152 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.96□□□□□ -0.33
VimP20152 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.96□□□□□ -0.33
VimP20152 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
VimP20152 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.96□□□□□ -0.33
VimP20152 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 Gm18766-201ENSMUST00000189811 808 ntBASIC12.96□□□□□ -0.33
VimP20152 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.96□□□□□ -0.33
VimP20152 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.96□□□□□ -0.33
VimP20152 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VimP20152 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.96□□□□□ -0.33
VimP20152 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
VimP20152 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VimP20152 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VimP20152 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VimP20152 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
VimP20152 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
VimP20152 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VimP20152 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
VimP20152 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.96□□□□□ -0.34
VimP20152 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VimP20152 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VimP20152 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VimP20152 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VimP20152 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VimP20152 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VimP20152 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
VimP20152 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VimP20152 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VimP20152 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VimP20152 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VimP20152 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VimP20152 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VimP20152 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VimP20152 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VimP20152 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms