Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fv4P11370 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fv4P11370 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Fv4P11370 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.36□□□□□ -0.43
Fv4P11370 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Fv4P11370 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Fv4P11370 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.36□□□□□ -0.43
Fv4P11370 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Fv4P11370 Gm12091-201ENSMUST00000146791 830 ntBASIC12.36□□□□□ -0.43
Fv4P11370 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Fv4P11370 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.36□□□□□ -0.43
Fv4P11370 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.36□□□□□ -0.43
Fv4P11370 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Gm8515-201ENSMUST00000194852 576 ntBASIC12.36□□□□□ -0.43
Fv4P11370 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.36□□□□□ -0.43
Fv4P11370 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.36□□□□□ -0.43
Fv4P11370 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Fv4P11370 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Fv4P11370 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Fv4P11370 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.36□□□□□ -0.43
Fv4P11370 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fv4P11370 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.35□□□□□ -0.43
Fv4P11370 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Fv4P11370 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.35□□□□□ -0.43
Fv4P11370 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.35□□□□□ -0.43
Fv4P11370 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Fv4P11370 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Gm8099-201ENSMUST00000200510 742 ntBASIC12.35□□□□□ -0.43
Fv4P11370 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.35□□□□□ -0.43
Fv4P11370 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.35□□□□□ -0.43
Fv4P11370 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Fv4P11370 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.35□□□□□ -0.43
Fv4P11370 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fv4P11370 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.35□□□□□ -0.43
Fv4P11370 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Fv4P11370 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Fv4P11370 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.34□□□□□ -0.43
Fv4P11370 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Fv4P11370 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.34□□□□□ -0.43
Fv4P11370 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.34□□□□□ -0.43
Fv4P11370 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fv4P11370 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms