Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC9.91□□□□□ -0.82
Ccl1P10146 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl1P10146 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Ccl1P10146 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC9.91□□□□□ -0.82
Ccl1P10146 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl1P10146 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.91□□□□□ -0.82
Ccl1P10146 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Ccl1P10146 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Ccl1P10146 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.91□□□□□ -0.82
Ccl1P10146 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl1P10146 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl1P10146 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl1P10146 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl1P10146 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl1P10146 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl1P10146 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl1P10146 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Ccl1P10146 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Ccl1P10146 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Ccl1P10146 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Ccl1P10146 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Ccl1P10146 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
Ccl1P10146 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccl1P10146 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC9.9□□□□□ -0.82
Ccl1P10146 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC9.9□□□□□ -0.82
Ccl1P10146 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccl1P10146 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC9.9□□□□□ -0.82
Ccl1P10146 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccl1P10146 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccl1P10146 AC154305.4-201ENSMUST00000224520 614 ntBASIC9.9□□□□□ -0.82
Ccl1P10146 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Gm37015-201ENSMUST00000192763 1521 ntBASIC9.9□□□□□ -0.82
Ccl1P10146 Gm5320-201ENSMUST00000207163 1519 ntBASIC9.9□□□□□ -0.82
Ccl1P10146 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.9□□□□□ -0.82
Ccl1P10146 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl1P10146 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccl1P10146 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccl1P10146 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Ccl1P10146 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccl1P10146 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
Ccl1P10146 Gm15222-202ENSMUST00000228667 1726 ntBASIC9.9□□□□□ -0.83
Ccl1P10146 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccl1P10146 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccl1P10146 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Ccl1P10146 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccl1P10146 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccl1P10146 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.9□□□□□ -0.83
Ccl1P10146 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
Ccl1P10146 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.9□□□□□ -0.83
Ccl1P10146 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ccl1P10146 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ccl1P10146 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Ccl1P10146 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC9.89□□□□□ -0.83
Ccl1P10146 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Ccl1P10146 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ccl1P10146 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ccl1P10146 Gm15653-201ENSMUST00000119247 907 ntBASIC9.89□□□□□ -0.83
Ccl1P10146 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Ccl1P10146 Gm14730-201ENSMUST00000122378 1045 ntBASIC9.89□□□□□ -0.83
Ccl1P10146 Gm18889-201ENSMUST00000174284 929 ntBASIC9.89□□□□□ -0.83
Ccl1P10146 Gm27772-201ENSMUST00000184900 187 ntBASIC9.89□□□□□ -0.83
Ccl1P10146 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Ccl1P10146 Gm7498-201ENSMUST00000203282 1084 ntBASIC9.89□□□□□ -0.83
Ccl1P10146 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms