Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm23935-201ENSMUST00000102303 57 ntBASIC11.16□□□□□ -0.62
UbbP0CG49 Gm24270-201ENSMUST00000102326 57 ntBASIC11.16□□□□□ -0.62
UbbP0CG49 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.16□□□□□ -0.62
UbbP0CG49 Gm15371-201ENSMUST00000117057 784 ntBASIC11.16□□□□□ -0.62
UbbP0CG49 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.16□□□□□ -0.62
UbbP0CG49 Gm13616-201ENSMUST00000120600 222 ntBASIC11.16□□□□□ -0.62
UbbP0CG49 Gm24245-201ENSMUST00000157318 57 ntBASIC11.16□□□□□ -0.62
UbbP0CG49 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
UbbP0CG49 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.16□□□□□ -0.62
UbbP0CG49 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Gm9797-201ENSMUST00000052902 613 ntBASIC11.16□□□□□ -0.62
UbbP0CG49 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
UbbP0CG49 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
UbbP0CG49 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.16□□□□□ -0.62
UbbP0CG49 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UbbP0CG49 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
UbbP0CG49 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.15□□□□□ -0.62
UbbP0CG49 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
UbbP0CG49 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
UbbP0CG49 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
UbbP0CG49 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.15□□□□□ -0.62
UbbP0CG49 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.15□□□□□ -0.62
UbbP0CG49 Gm27838-201ENSMUST00000184829 128 ntBASIC11.15□□□□□ -0.62
UbbP0CG49 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.15□□□□□ -0.62
UbbP0CG49 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Gm43575-201ENSMUST00000196420 516 ntBASIC11.15□□□□□ -0.62
UbbP0CG49 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
UbbP0CG49 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.15□□□□□ -0.62
UbbP0CG49 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
UbbP0CG49 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.15□□□□□ -0.62
UbbP0CG49 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.15□□□□□ -0.62
UbbP0CG49 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
UbbP0CG49 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.15□□□□□ -0.62
UbbP0CG49 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UbbP0CG49 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
UbbP0CG49 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
UbbP0CG49 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
UbbP0CG49 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
UbbP0CG49 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.14□□□□□ -0.63
UbbP0CG49 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
UbbP0CG49 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.14□□□□□ -0.63
UbbP0CG49 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.14□□□□□ -0.63
UbbP0CG49 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.14□□□□□ -0.63
UbbP0CG49 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UbbP0CG49 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms