Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.57□□□□□ -0.24
TnfP06804 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TnfP06804 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TnfP06804 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TnfP06804 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TnfP06804 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.56□□□□□ -0.24
TnfP06804 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Gm23270-201ENSMUST00000104055 131 ntBASIC13.56□□□□□ -0.24
TnfP06804 Gm25214-201ENSMUST00000104573 129 ntBASIC13.56□□□□□ -0.24
TnfP06804 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Gm15808-201ENSMUST00000119046 604 ntBASIC13.56□□□□□ -0.24
TnfP06804 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.56□□□□□ -0.24
TnfP06804 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TnfP06804 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.56□□□□□ -0.24
TnfP06804 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.56□□□□□ -0.24
TnfP06804 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.56□□□□□ -0.24
TnfP06804 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.56□□□□□ -0.24
TnfP06804 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TnfP06804 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.56□□□□□ -0.24
TnfP06804 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.56□□□□□ -0.24
TnfP06804 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TnfP06804 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.56□□□□□ -0.24
TnfP06804 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TnfP06804 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TnfP06804 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TnfP06804 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.55□□□□□ -0.24
TnfP06804 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.55□□□□□ -0.24
TnfP06804 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.55□□□□□ -0.24
TnfP06804 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Gm8018-201ENSMUST00000173536 789 ntBASIC13.55□□□□□ -0.24
TnfP06804 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.55□□□□□ -0.24
TnfP06804 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.55□□□□□ -0.24
TnfP06804 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TnfP06804 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TnfP06804 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TnfP06804 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TnfP06804 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.54□□□□□ -0.24
TnfP06804 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.54□□□□□ -0.24
TnfP06804 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TnfP06804 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms