Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.42□□□□□ -0.58
P06344 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.42□□□□□ -0.58
P06344 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.42□□□□□ -0.58
P06344 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.42□□□□□ -0.58
P06344 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.42□□□□□ -0.58
P06344 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.42□□□□□ -0.58
P06344 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
P06344 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P06344 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P06344 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
P06344 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
P06344 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
P06344 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.41□□□□□ -0.58
P06344 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.41□□□□□ -0.58
P06344 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.41□□□□□ -0.58
P06344 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.41□□□□□ -0.58
P06344 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
P06344 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Gm6023-201ENSMUST00000118217 606 ntBASIC11.41□□□□□ -0.58
P06344 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.41□□□□□ -0.58
P06344 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.41□□□□□ -0.58
P06344 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.41□□□□□ -0.58
P06344 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.41□□□□□ -0.58
P06344 Gm42627-201ENSMUST00000197347 224 ntBASIC11.41□□□□□ -0.58
P06344 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.41□□□□□ -0.58
P06344 Gm8099-201ENSMUST00000200510 742 ntBASIC11.41□□□□□ -0.58
P06344 Gm18584-201ENSMUST00000203098 964 ntBASIC11.41□□□□□ -0.58
P06344 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.41□□□□□ -0.58
P06344 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.41□□□□□ -0.58
P06344 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.41□□□□□ -0.58
P06344 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.41□□□□□ -0.58
P06344 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.41□□□□□ -0.58
P06344 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
P06344 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.41□□□□□ -0.58
P06344 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
P06344 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P06344 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
P06344 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.4□□□□□ -0.58
P06344 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.4□□□□□ -0.58
P06344 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
P06344 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.4□□□□□ -0.58
P06344 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
P06344 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.4□□□□□ -0.58
P06344 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.4□□□□□ -0.58
P06344 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.4□□□□□ -0.58
P06344 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.4□□□□□ -0.58
P06344 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.4□□□□□ -0.58
P06344 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.4□□□□□ -0.58
P06344 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P06344 Gm5781-201ENSMUST00000219792 443 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms