Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04224 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P04224 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
P04224 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.25□□□□□ -0.61
P04224 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
P04224 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.25□□□□□ -0.61
P04224 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
P04224 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
P04224 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.25□□□□□ -0.61
P04224 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Mir449b-201ENSMUST00000104833 80 ntBASIC11.25□□□□□ -0.61
P04224 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.25□□□□□ -0.61
P04224 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.25□□□□□ -0.61
P04224 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.25□□□□□ -0.61
P04224 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Gm24420-201ENSMUST00000176676 59 ntBASIC11.25□□□□□ -0.61
P04224 Gm2213-201ENSMUST00000197485 688 ntBASIC11.25□□□□□ -0.61
P04224 Gm43514-201ENSMUST00000198852 424 ntBASIC11.25□□□□□ -0.61
P04224 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Gm5425-201ENSMUST00000214125 459 ntBASIC11.25□□□□□ -0.61
P04224 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.25□□□□□ -0.61
P04224 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
P04224 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
P04224 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.25□□□□□ -0.61
P04224 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
P04224 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.25□□□□□ -0.61
P04224 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
P04224 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
P04224 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.25□□□□□ -0.61
P04224 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04224 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P04224 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.24□□□□□ -0.61
P04224 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.24□□□□□ -0.61
P04224 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.24□□□□□ -0.61
P04224 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
P04224 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
P04224 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P04224 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.24□□□□□ -0.61
P04224 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.24□□□□□ -0.61
P04224 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.24□□□□□ -0.61
P04224 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.24□□□□□ -0.61
P04224 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P04224 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P04224 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P04224 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.24□□□□□ -0.61
P04224 Gm27533-201ENSMUST00000183800 152 ntBASIC11.24□□□□□ -0.61
P04224 Gm5312-201ENSMUST00000203728 547 ntBASIC11.24□□□□□ -0.61
P04224 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
P04224 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
P04224 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.24□□□□□ -0.61
P04224 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P04224 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.24□□□□□ -0.61
P04224 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms