Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Hoxa3P02831 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Hoxa3P02831 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Hoxa3P02831 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Hoxa3P02831 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.75□□□□□ -0.69
Hoxa3P02831 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Hoxa3P02831 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Hoxa3P02831 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Hoxa3P02831 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.75□□□□□ -0.69
Hoxa3P02831 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Hoxa3P02831 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.75□□□□□ -0.69
Hoxa3P02831 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Hoxa3P02831 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Gm14723-201ENSMUST00000118686 215 ntBASIC10.75□□□□□ -0.69
Hoxa3P02831 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.75□□□□□ -0.69
Hoxa3P02831 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.75□□□□□ -0.69
Hoxa3P02831 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Gm7809-201ENSMUST00000153199 742 ntBASIC10.75□□□□□ -0.69
Hoxa3P02831 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Gm38158-201ENSMUST00000194617 339 ntBASIC10.75□□□□□ -0.69
Hoxa3P02831 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.75□□□□□ -0.69
Hoxa3P02831 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Gm19163-201ENSMUST00000223313 780 ntBASIC10.75□□□□□ -0.69
Hoxa3P02831 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
Hoxa3P02831 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Hoxa3P02831 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.75□□□□□ -0.69
Hoxa3P02831 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Hoxa3P02831 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Hoxa3P02831 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.75□□□□□ -0.69
Hoxa3P02831 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.75□□□□□ -0.69
Hoxa3P02831 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.75□□□□□ -0.69
Hoxa3P02831 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hoxa3P02831 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.74□□□□□ -0.69
Hoxa3P02831 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
Hoxa3P02831 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hoxa3P02831 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.74□□□□□ -0.69
Hoxa3P02831 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.74□□□□□ -0.69
Hoxa3P02831 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.74□□□□□ -0.69
Hoxa3P02831 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms