Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
TcraP01849 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.35□□□□□ -0.91
TcraP01849 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Gm22065-201ENSMUST00000103753 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm22066-201ENSMUST00000103761 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm24932-201ENSMUST00000103763 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm24115-201ENSMUST00000103799 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm22190-201ENSMUST00000103827 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm22191-201ENSMUST00000103831 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm24721-201ENSMUST00000103849 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm28018-201ENSMUST00000103869 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm26399-201ENSMUST00000103937 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC9.35□□□□□ -0.91
TcraP01849 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
TcraP01849 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Gm13015-201ENSMUST00000118674 204 ntBASIC9.35□□□□□ -0.91
TcraP01849 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
TcraP01849 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
TcraP01849 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
TcraP01849 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC9.35□□□□□ -0.91
TcraP01849 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC9.35□□□□□ -0.91
TcraP01849 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Gm25349-201ENSMUST00000177728 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm23616-201ENSMUST00000177797 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm25871-201ENSMUST00000177816 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm24752-201ENSMUST00000178240 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm24496-201ENSMUST00000178287 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm25649-201ENSMUST00000178476 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm25548-201ENSMUST00000178681 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm23147-201ENSMUST00000178841 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm26095-201ENSMUST00000179270 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm22171-201ENSMUST00000179283 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm23936-201ENSMUST00000179354 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm22619-201ENSMUST00000179516 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm25255-201ENSMUST00000179579 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm24755-201ENSMUST00000179691 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm26506-201ENSMUST00000179692 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm25086-201ENSMUST00000179931 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm23243-201ENSMUST00000180047 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm24659-201ENSMUST00000180212 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm24169-201ENSMUST00000180244 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm23689-201ENSMUST00000180354 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm27359-201ENSMUST00000184153 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm27785-201ENSMUST00000184268 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm27466-201ENSMUST00000184396 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Gm27703-201ENSMUST00000184836 110 ntBASIC9.35□□□□□ -0.91
TcraP01849 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
TcraP01849 AC132104.2-201ENSMUST00000215011 266 ntBASIC9.35□□□□□ -0.91
TcraP01849 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
TcraP01849 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC9.35□□□□□ -0.91
TcraP01849 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.35□□□□□ -0.91
TcraP01849 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
TcraP01849 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.35□□□□□ -0.91
TcraP01849 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TcraP01849 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
TcraP01849 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC9.34□□□□□ -0.91
TcraP01849 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Gm15770-201ENSMUST00000117498 584 ntBASIC9.34□□□□□ -0.91
TcraP01849 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC9.34□□□□□ -0.91
TcraP01849 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC9.34□□□□□ -0.91
TcraP01849 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC9.34□□□□□ -0.91
TcraP01849 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC9.34□□□□□ -0.91
TcraP01849 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
TcraP01849 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
TcraP01849 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms