Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igh-VJ558P01758 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Gm27682-201ENSMUST00000183930 110 ntBASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Igh-VJ558P01758 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Gm9630-201ENSMUST00000178304 885 ntBASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Igh-VJ558P01758 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.03□□□□□ -0.64
Igh-VJ558P01758 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Igh-VJ558P01758 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms