Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.38□□□□□ -0.59
Col5a1O88207 Gm23251-201ENSMUST00000103773 110 ntBASIC11.38□□□□□ -0.59
Col5a1O88207 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Col5a1O88207 Gm13035-201ENSMUST00000117496 342 ntBASIC11.38□□□□□ -0.59
Col5a1O88207 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.38□□□□□ -0.59
Col5a1O88207 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.38□□□□□ -0.59
Col5a1O88207 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.38□□□□□ -0.59
Col5a1O88207 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.38□□□□□ -0.59
Col5a1O88207 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.38□□□□□ -0.59
Col5a1O88207 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.38□□□□□ -0.59
Col5a1O88207 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.38□□□□□ -0.59
Col5a1O88207 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Col5a1O88207 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Col5a1O88207 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Col5a1O88207 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.38□□□□□ -0.59
Col5a1O88207 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col5a1O88207 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.37□□□□□ -0.59
Col5a1O88207 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.37□□□□□ -0.59
Col5a1O88207 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Col5a1O88207 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Col5a1O88207 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.37□□□□□ -0.59
Col5a1O88207 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Col5a1O88207 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.37□□□□□ -0.59
Col5a1O88207 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Gm9996-201ENSMUST00000070359 913 ntBASIC11.37□□□□□ -0.59
Col5a1O88207 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.37□□□□□ -0.59
Col5a1O88207 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.37□□□□□ -0.59
Col5a1O88207 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.37□□□□□ -0.59
Col5a1O88207 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.37□□□□□ -0.59
Col5a1O88207 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.37□□□□□ -0.59
Col5a1O88207 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Col5a1O88207 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.37□□□□□ -0.59
Col5a1O88207 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.37□□□□□ -0.59
Col5a1O88207 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.37□□□□□ -0.59
Col5a1O88207 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Col5a1O88207 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.37□□□□□ -0.59
Col5a1O88207 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Col5a1O88207 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Col5a1O88207 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.37□□□□□ -0.59
Col5a1O88207 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Col5a1O88207 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.37□□□□□ -0.59
Col5a1O88207 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Gm23949-201ENSMUST00000104027 127 ntBASIC11.37□□□□□ -0.59
Col5a1O88207 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Col5a1O88207 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.37□□□□□ -0.59
Col5a1O88207 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Gm37028-201ENSMUST00000194276 107 ntBASIC11.37□□□□□ -0.59
Col5a1O88207 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.37□□□□□ -0.59
Col5a1O88207 Mir7686-201ENSMUST00000200604 57 ntBASIC11.37□□□□□ -0.59
Col5a1O88207 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.37□□□□□ -0.59
Col5a1O88207 Gm9463-201ENSMUST00000206707 601 ntBASIC11.37□□□□□ -0.59
Col5a1O88207 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.37□□□□□ -0.59
Col5a1O88207 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.37□□□□□ -0.59
Col5a1O88207 Gm45598-202ENSMUST00000210719 986 ntBASIC11.37□□□□□ -0.59
Col5a1O88207 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col5a1O88207 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms