Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.05□□□□□ -0.16
Trdmt1O55055 Gm15703-201ENSMUST00000120250 880 ntBASIC14.05□□□□□ -0.16
Trdmt1O55055 Gm12266-201ENSMUST00000120311 962 ntBASIC14.05□□□□□ -0.16
Trdmt1O55055 Gm24514-201ENSMUST00000174961 285 ntBASIC14.05□□□□□ -0.16
Trdmt1O55055 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.05□□□□□ -0.16
Trdmt1O55055 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trdmt1O55055 Gm19187-201ENSMUST00000206781 892 ntBASIC14.05□□□□□ -0.16
Trdmt1O55055 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.05□□□□□ -0.16
Trdmt1O55055 Gm18730-201ENSMUST00000218038 343 ntBASIC14.05□□□□□ -0.16
Trdmt1O55055 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.05□□□□□ -0.16
Trdmt1O55055 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.05□□□□□ -0.16
Trdmt1O55055 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.05□□□□□ -0.16
Trdmt1O55055 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trdmt1O55055 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Trdmt1O55055 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Trdmt1O55055 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trdmt1O55055 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.04□□□□□ -0.16
Trdmt1O55055 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.04□□□□□ -0.16
Trdmt1O55055 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Gm44100-201ENSMUST00000204329 436 ntBASIC14.04□□□□□ -0.16
Trdmt1O55055 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trdmt1O55055 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.04□□□□□ -0.16
Trdmt1O55055 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trdmt1O55055 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.04□□□□□ -0.16
Trdmt1O55055 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trdmt1O55055 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trdmt1O55055 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Trdmt1O55055 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trdmt1O55055 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.03□□□□□ -0.16
Trdmt1O55055 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trdmt1O55055 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Trdmt1O55055 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.03□□□□□ -0.16
Trdmt1O55055 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Trdmt1O55055 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.03□□□□□ -0.16
Trdmt1O55055 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.03□□□□□ -0.16
Trdmt1O55055 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.03□□□□□ -0.16
Trdmt1O55055 Gm42937-201ENSMUST00000197360 752 ntBASIC14.03□□□□□ -0.16
Trdmt1O55055 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.03□□□□□ -0.16
Trdmt1O55055 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.03□□□□□ -0.16
Trdmt1O55055 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.03□□□□□ -0.16
Trdmt1O55055 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trdmt1O55055 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms