Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.09□□□□□ -0.31
Phox2bO35690 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Phox2bO35690 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Phox2bO35690 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Gm12507-201ENSMUST00000119155 415 ntBASIC13.09□□□□□ -0.31
Phox2bO35690 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Phox2bO35690 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.09□□□□□ -0.31
Phox2bO35690 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Gm9555-201ENSMUST00000200908 583 ntBASIC13.09□□□□□ -0.31
Phox2bO35690 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.09□□□□□ -0.31
Phox2bO35690 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.09□□□□□ -0.31
Phox2bO35690 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.09□□□□□ -0.31
Phox2bO35690 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Phox2bO35690 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Phox2bO35690 AC115784.1-201ENSMUST00000227687 1010 ntBASIC13.09□□□□□ -0.31
Phox2bO35690 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.09□□□□□ -0.31
Phox2bO35690 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.09□□□□□ -0.31
Phox2bO35690 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.09□□□□□ -0.31
Phox2bO35690 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Phox2bO35690 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Phox2bO35690 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.08□□□□□ -0.31
Phox2bO35690 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Phox2bO35690 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.08□□□□□ -0.31
Phox2bO35690 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Phox2bO35690 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Phox2bO35690 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Phox2bO35690 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Phox2bO35690 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.08□□□□□ -0.32
Phox2bO35690 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Phox2bO35690 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Phox2bO35690 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Phox2bO35690 Gm5277-201ENSMUST00000164923 556 ntBASIC13.08□□□□□ -0.32
Phox2bO35690 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.08□□□□□ -0.32
Phox2bO35690 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.08□□□□□ -0.32
Phox2bO35690 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.08□□□□□ -0.32
Phox2bO35690 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Phox2bO35690 Gm25517-201ENSMUST00000083865 134 ntBASIC13.08□□□□□ -0.32
Phox2bO35690 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Phox2bO35690 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Phox2bO35690 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.08□□□□□ -0.32
Phox2bO35690 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Phox2bO35690 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Phox2bO35690 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Phox2bO35690 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Phox2bO35690 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Phox2bO35690 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Phox2bO35690 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Phox2bO35690 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms