Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Gm12151-201ENSMUST00000121374 290 ntBASIC10.13□□□□□ -0.79
Efnb3O35393 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
Efnb3O35393 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.13□□□□□ -0.79
Efnb3O35393 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.13□□□□□ -0.79
Efnb3O35393 Gm24694-201ENSMUST00000180054 110 ntBASIC10.13□□□□□ -0.79
Efnb3O35393 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Efnb3O35393 Gm27663-201ENSMUST00000184839 110 ntBASIC10.13□□□□□ -0.79
Efnb3O35393 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.13□□□□□ -0.79
Efnb3O35393 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.13□□□□□ -0.79
Efnb3O35393 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.13□□□□□ -0.79
Efnb3O35393 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.13□□□□□ -0.79
Efnb3O35393 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
Efnb3O35393 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.13□□□□□ -0.79
Efnb3O35393 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Efnb3O35393 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Efnb3O35393 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Efnb3O35393 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Efnb3O35393 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Efnb3O35393 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.12□□□□□ -0.79
Efnb3O35393 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.12□□□□□ -0.79
Efnb3O35393 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.12□□□□□ -0.79
Efnb3O35393 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.12□□□□□ -0.79
Efnb3O35393 Gm15487-201ENSMUST00000122373 465 ntBASIC10.12□□□□□ -0.79
Efnb3O35393 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Efnb3O35393 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.12□□□□□ -0.79
Efnb3O35393 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.12□□□□□ -0.79
Efnb3O35393 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.12□□□□□ -0.79
Efnb3O35393 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.12□□□□□ -0.79
Efnb3O35393 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Efnb3O35393 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.12□□□□□ -0.79
Efnb3O35393 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.12□□□□□ -0.79
Efnb3O35393 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Efnb3O35393 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.12□□□□□ -0.79
Efnb3O35393 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Efnb3O35393 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Efnb3O35393 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Efnb3O35393 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Efnb3O35393 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Efnb3O35393 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Efnb3O35393 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Efnb3O35393 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Efnb3O35393 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Efnb3O35393 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Efnb3O35393 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Efnb3O35393 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Efnb3O35393 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.11□□□□□ -0.79
Efnb3O35393 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Efnb3O35393 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Efnb3O35393 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.11□□□□□ -0.79
Efnb3O35393 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.11□□□□□ -0.79
Efnb3O35393 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Efnb3O35393 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Efnb3O35393 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Efnb3O35393 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Efnb3O35393 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms