Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm13888-201ENSMUST00000119148 422 ntBASIC19.31■□□□□ 0.68
Polr1aO35134 Gm11246-201ENSMUST00000120880 345 ntBASIC19.31■□□□□ 0.68
Polr1aO35134 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr1aO35134 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC19.31■□□□□ 0.68
Polr1aO35134 Gm19287-201ENSMUST00000203190 358 ntBASIC19.31■□□□□ 0.68
Polr1aO35134 Gm9463-201ENSMUST00000206707 601 ntBASIC19.31■□□□□ 0.68
Polr1aO35134 AC132901.1-201ENSMUST00000224345 508 ntBASIC19.31■□□□□ 0.68
Polr1aO35134 AC159103.1-201ENSMUST00000228325 429 ntBASIC19.31■□□□□ 0.68
Polr1aO35134 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr1aO35134 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Polr1aO35134 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr1aO35134 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Polr1aO35134 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Polr1aO35134 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC19.31■□□□□ 0.68
Polr1aO35134 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr1aO35134 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr1aO35134 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr1aO35134 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr1aO35134 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Polr1aO35134 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Polr1aO35134 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC19.31■□□□□ 0.68
Polr1aO35134 Gm22144-201ENSMUST00000157402 102 ntBASIC19.31■□□□□ 0.68
Polr1aO35134 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC19.31■□□□□ 0.68
Polr1aO35134 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Polr1aO35134 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC19.31■□□□□ 0.68
Polr1aO35134 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Polr1aO35134 Gm44980-201ENSMUST00000205826 314 ntBASIC19.31■□□□□ 0.68
Polr1aO35134 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Polr1aO35134 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC19.31■□□□□ 0.68
Polr1aO35134 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Polr1aO35134 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC19.31■□□□□ 0.68
Polr1aO35134 Gm9361-201ENSMUST00000198695 1507 ntBASIC19.31■□□□□ 0.68
Polr1aO35134 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Polr1aO35134 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr1aO35134 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr1aO35134 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Polr1aO35134 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Polr1aO35134 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Polr1aO35134 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr1aO35134 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC19.3■□□□□ 0.68
Polr1aO35134 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
Polr1aO35134 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr1aO35134 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Polr1aO35134 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC19.3■□□□□ 0.68
Polr1aO35134 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Polr1aO35134 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC19.3■□□□□ 0.68
Polr1aO35134 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC19.3■□□□□ 0.68
Polr1aO35134 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC19.3■□□□□ 0.68
Polr1aO35134 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC19.3■□□□□ 0.68
Polr1aO35134 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Polr1aO35134 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Polr1aO35134 Gm44711-201ENSMUST00000205414 1264 ntBASIC19.3■□□□□ 0.68
Polr1aO35134 Gm17831-201ENSMUST00000205579 900 ntBASIC19.3■□□□□ 0.68
Polr1aO35134 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Polr1aO35134 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Polr1aO35134 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Polr1aO35134 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Polr1aO35134 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Polr1aO35134 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr1aO35134 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr1aO35134 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Polr1aO35134 Gm37912-201ENSMUST00000191895 3076 ntBASIC19.3■□□□□ 0.68
Polr1aO35134 Gm10176-201ENSMUST00000159707 2264 ntBASIC19.3■□□□□ 0.68
Polr1aO35134 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Polr1aO35134 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Polr1aO35134 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Polr1aO35134 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 Gm13263-201ENSMUST00000121271 838 ntBASIC19.29■□□□□ 0.68
Polr1aO35134 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Polr1aO35134 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 Gm43721-201ENSMUST00000199677 2313 ntBASIC19.29■□□□□ 0.68
Polr1aO35134 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Polr1aO35134 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC19.29■□□□□ 0.68
Polr1aO35134 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Polr1aO35134 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Polr1aO35134 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Polr1aO35134 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Polr1aO35134 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Gm24891-201ENSMUST00000104391 136 ntBASIC19.28■□□□□ 0.68
Polr1aO35134 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC19.28■□□□□ 0.68
Polr1aO35134 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Gm14247-201ENSMUST00000120950 237 ntBASIC19.28■□□□□ 0.68
Polr1aO35134 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC19.28■□□□□ 0.68
Polr1aO35134 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Polr1aO35134 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms