Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa8J3QNX5 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Gm11524-201ENSMUST00000119349 807 ntBASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Gm26315-201ENSMUST00000083890 321 ntBASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa8J3QNX5 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Gm14701-201ENSMUST00000117156 348 ntBASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Gm44124-201ENSMUST00000204159 472 ntBASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.66□□□□□ -0.54
Shisa8J3QNX5 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.66□□□□□ -0.54
Shisa8J3QNX5 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Shisa8J3QNX5 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.65□□□□□ -0.54
Shisa8J3QNX5 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.65□□□□□ -0.54
Shisa8J3QNX5 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms