Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Gm45925-201ENSMUST00000218882 744 ntBASIC15.39■□□□□ 0.05
NpcdF8VQB8 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.39■□□□□ 0.05
NpcdF8VQB8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NpcdF8VQB8 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.38■□□□□ 0.05
NpcdF8VQB8 Gm12795-201ENSMUST00000117594 539 ntBASIC15.38■□□□□ 0.05
NpcdF8VQB8 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC15.38■□□□□ 0.05
NpcdF8VQB8 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Gm37201-201ENSMUST00000191845 523 ntBASIC15.38■□□□□ 0.05
NpcdF8VQB8 Gm38092-201ENSMUST00000195600 653 ntBASIC15.38■□□□□ 0.05
NpcdF8VQB8 AC124457.1-201ENSMUST00000198845 120 ntBASIC15.38■□□□□ 0.05
NpcdF8VQB8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.38■□□□□ 0.05
NpcdF8VQB8 Gm43916-201ENSMUST00000205062 967 ntBASIC15.38■□□□□ 0.05
NpcdF8VQB8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NpcdF8VQB8 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NpcdF8VQB8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NpcdF8VQB8 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NpcdF8VQB8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NpcdF8VQB8 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.37■□□□□ 0.05
NpcdF8VQB8 Gm14460-201ENSMUST00000121511 639 ntBASIC15.37■□□□□ 0.05
NpcdF8VQB8 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC15.37■□□□□ 0.05
NpcdF8VQB8 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC15.37■□□□□ 0.05
NpcdF8VQB8 Gm45550-201ENSMUST00000209380 946 ntBASIC15.37■□□□□ 0.05
NpcdF8VQB8 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
NpcdF8VQB8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NpcdF8VQB8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NpcdF8VQB8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NpcdF8VQB8 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.37■□□□□ 0.05
NpcdF8VQB8 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NpcdF8VQB8 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NpcdF8VQB8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.37■□□□□ 0.05
NpcdF8VQB8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NpcdF8VQB8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.37■□□□□ 0.05
NpcdF8VQB8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Rn7s6-201ENSMUST00000175005 291 ntBASIC15.36■□□□□ 0.05
NpcdF8VQB8 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms