Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm32999-201ENSMUST00000192693 562 ntBASIC15.33■□□□□ 0.04
Ube4aE9Q735 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC15.33■□□□□ 0.04
Ube4aE9Q735 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4aE9Q735 Gm8385-201ENSMUST00000058999 643 ntBASIC15.33■□□□□ 0.04
Ube4aE9Q735 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4aE9Q735 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ube4aE9Q735 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4aE9Q735 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4aE9Q735 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4aE9Q735 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4aE9Q735 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4aE9Q735 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4aE9Q735 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.33■□□□□ 0.04
Ube4aE9Q735 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4aE9Q735 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ube4aE9Q735 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.33■□□□□ 0.04
Ube4aE9Q735 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ube4aE9Q735 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Gm42937-201ENSMUST00000197360 752 ntBASIC15.32■□□□□ 0.04
Ube4aE9Q735 Nsd1-205ENSMUST00000224693 852 ntBASIC15.32■□□□□ 0.04
Ube4aE9Q735 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube4aE9Q735 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Ube4aE9Q735 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.31■□□□□ 0.04
Ube4aE9Q735 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Mir6927-201ENSMUST00000184494 71 ntBASIC15.31■□□□□ 0.04
Ube4aE9Q735 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC15.31■□□□□ 0.04
Ube4aE9Q735 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Ube4aE9Q735 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.3■□□□□ 0.04
Ube4aE9Q735 B9d1os-201ENSMUST00000137010 674 ntBASIC15.3■□□□□ 0.04
Ube4aE9Q735 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ube4aE9Q735 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms