Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Gm13736-201ENSMUST00000119272 253 ntBASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Gm5863-201ENSMUST00000121760 1008 ntBASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Cts7-204ENSMUST00000225321 1257 ntBASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tmf1B9EKI3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Ssr1-203ENSMUST00000225246 1825 ntBASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Gm15808-201ENSMUST00000119046 604 ntBASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Gm5637-201ENSMUST00000153890 1119 ntBASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Mir5132-201ENSMUST00000175166 71 ntBASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Gm6621-201ENSMUST00000193251 772 ntBASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Gm44405-201ENSMUST00000198952 126 ntBASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Gm7002-201ENSMUST00000221386 2165 ntBASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Gm6210-201ENSMUST00000204734 1942 ntBASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tmf1B9EKI3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Gm43858-201ENSMUST00000199418 1778 ntBASIC17.28■□□□□ 0.36
Tmf1B9EKI3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Gm13342-201ENSMUST00000121055 207 ntBASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Gm43068-201ENSMUST00000201095 1273 ntBASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Gm6334-201ENSMUST00000207083 228 ntBASIC17.28■□□□□ 0.36
Tmf1B9EKI3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tmf1B9EKI3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tmf1B9EKI3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tmf1B9EKI3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tmf1B9EKI3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tmf1B9EKI3 Gm4366-201ENSMUST00000201488 1342 ntBASIC17.27■□□□□ 0.36
Tmf1B9EKI3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms