Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Tcf7l2-212ENSMUST00000111659 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm37821-201ENSMUST00000195476 1843 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm43504-201ENSMUST00000196056 2038 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Olfr462-202ENSMUST00000213672 2021 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Uox-201ENSMUST00000029837 2737 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm45265-201ENSMUST00000210852 2497 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Prpf38a-201ENSMUST00000079213 1516 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gabpa-202ENSMUST00000114184 2202 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm42939-201ENSMUST00000197514 2205 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 AC022775.1-201ENSMUST00000228163 2698 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Mtmr6-203ENSMUST00000224366 1968 ntAPPRIS ALT2 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Xlr4c-203ENSMUST00000114530 1220 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm14509-201ENSMUST00000117312 1286 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm11416-201ENSMUST00000119111 863 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm5943-201ENSMUST00000119458 459 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm11617-201ENSMUST00000119609 639 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm11484-201ENSMUST00000119808 338 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm6829-201ENSMUST00000119858 360 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm2005-201ENSMUST00000120759 542 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Fank1-202ENSMUST00000121560 475 ntTSL 5 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm11692-201ENSMUST00000122121 902 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm11847-201ENSMUST00000125165 1119 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm6956-201ENSMUST00000134724 546 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm14457-201ENSMUST00000148069 1161 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm25393-201ENSMUST00000157336 285 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm22383-201ENSMUST00000158188 327 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm24946-201ENSMUST00000158332 106 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm24976-201ENSMUST00000158972 135 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 AA543401-201ENSMUST00000164248 1269 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm17129-201ENSMUST00000168168 505 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC2.75□□□□□ -1.97
Gm4559A4IF42 Gm2539-203ENSMUST00000181352 746 ntBASIC2.75□□□□□ -1.97
Gm4559A4IF42 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms