Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav12d-1A0N8R0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Gm27390-201ENSMUST00000184516 176 ntBASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Gm6983-201ENSMUST00000214912 628 ntBASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav12d-1A0N8R0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav12d-1A0N8R0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms