Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Gm43170-201ENSMUST00000199827 612 ntBASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trbv29A0A0G2LB96 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Gm9630-201ENSMUST00000178304 885 ntBASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Gm18307-201ENSMUST00000206864 949 ntBASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Gm16372-201ENSMUST00000073088 450 ntBASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trbv29A0A0G2LB96 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trbv29A0A0G2LB96 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms