Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm8805-201ENSMUST00000117848 313 ntBASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm11803-201ENSMUST00000119966 444 ntBASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm6244-201ENSMUST00000178732 841 ntBASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Proscos-202ENSMUST00000178990 666 ntBASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm28693-202ENSMUST00000190758 331 ntBASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 AC132467.2-202ENSMUST00000227726 559 ntBASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Cog3-203ENSMUST00000227473 4197 ntBASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm14608-201ENSMUST00000120030 1553 ntBASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Mir686-201ENSMUST00000102174 109 ntBASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Mir1894-201ENSMUST00000122802 81 ntBASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm8810-201ENSMUST00000172895 754 ntBASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm9061-201ENSMUST00000182707 1006 ntBASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm27892-201ENSMUST00000185017 106 ntBASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms