Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5-4A0A075B652 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Gm7488-201ENSMUST00000117148 684 ntBASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Gm15429-201ENSMUST00000151268 798 ntBASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Mir7654-201ENSMUST00000185082 70 ntBASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Itm2b-204ENSMUST00000228637 783 ntBASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5-4A0A075B652 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms