Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Gm18733-201ENSMUST00000173950 856 ntBASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 AC166997.1-201ENSMUST00000225122 572 ntBASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Psmb5-202ENSMUST00000227257 622 ntBASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Gm10819-201ENSMUST00000099988 561 ntBASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm11025-201ENSMUST00000140773 466 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm29310-201ENSMUST00000185468 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm21825-201ENSMUST00000185728 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm29109-201ENSMUST00000185895 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm21896-201ENSMUST00000186520 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm21873-201ENSMUST00000186728 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm21794-201ENSMUST00000187056 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm21880-201ENSMUST00000187275 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm21826-201ENSMUST00000187451 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm21198-201ENSMUST00000188393 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm21749-201ENSMUST00000189343 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm21901-201ENSMUST00000189568 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm29424-201ENSMUST00000189716 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm28599-201ENSMUST00000189838 694 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm21867-201ENSMUST00000189917 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm29269-201ENSMUST00000190087 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm21722-201ENSMUST00000190153 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm28423-201ENSMUST00000190701 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm21899-201ENSMUST00000190745 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm21910-201ENSMUST00000191163 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm21849-201ENSMUST00000191571 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm28678-201ENSMUST00000191593 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Ighv1-51-201ENSMUST00000192903 354 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm20910-201ENSMUST00000193268 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm38225-201ENSMUST00000194001 393 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm21871-201ENSMUST00000194621 696 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm44945-201ENSMUST00000206764 1187 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gpr146-202ENSMUST00000053120 1040 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm3695-201ENSMUST00000087222 1009 ntBASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms