Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.56□□□□□ -0.56
H2afb3S4R1G7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Gm15429-201ENSMUST00000151268 798 ntBASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Mir6392-201ENSMUST00000184924 108 ntBASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.56□□□□□ -0.56
H2afb3S4R1G7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.56□□□□□ -0.56
H2afb3S4R1G7 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
H2afb3S4R1G7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Mir7654-201ENSMUST00000185082 70 ntBASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Gm37917-201ENSMUST00000194711 392 ntBASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Gm6458-201ENSMUST00000211573 635 ntBASIC11.55□□□□□ -0.56
H2afb3S4R1G7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afb3S4R1G7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Gm5687-201ENSMUST00000118252 640 ntBASIC11.54□□□□□ -0.56
H2afb3S4R1G7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
H2afb3S4R1G7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms