Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm13813-201ENSMUST00000120998 787 ntBASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm23363-201ENSMUST00000175024 79 ntBASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm22121-201ENSMUST00000175148 54 ntBASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm26927-201ENSMUST00000182385 965 ntBASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm27682-201ENSMUST00000183930 110 ntBASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Mir339-201ENSMUST00000083659 96 ntBASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Atp6ap1Q9R1Q9 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm12363-201ENSMUST00000122250 668 ntBASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.54□□□□□ -0.4
Atp6ap1Q9R1Q9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm12384-201ENSMUST00000119228 919 ntBASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 Gm27731-201ENSMUST00000185192 107 ntBASIC12.53□□□□□ -0.4
Atp6ap1Q9R1Q9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms