Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Gm38223-201ENSMUST00000194484 695 ntBASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1aQ9QWF0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Mir6977-201ENSMUST00000184960 64 ntBASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.38□□□□□ -0.11
Chaf1aQ9QWF0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1aQ9QWF0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms