Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpxQ9JHS4 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpxQ9JHS4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ClpxQ9JHS4 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.77□□□□□ -0.53
ClpxQ9JHS4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.77□□□□□ -0.53
ClpxQ9JHS4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpxQ9JHS4 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpxQ9JHS4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ClpxQ9JHS4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClpxQ9JHS4 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Gm37917-201ENSMUST00000194711 392 ntBASIC11.76□□□□□ -0.53
ClpxQ9JHS4 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.76□□□□□ -0.53
ClpxQ9JHS4 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Gm17330-201ENSMUST00000221047 165 ntBASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClpxQ9JHS4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Gm27772-201ENSMUST00000184900 187 ntBASIC11.75□□□□□ -0.53
ClpxQ9JHS4 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.75□□□□□ -0.53
ClpxQ9JHS4 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClpxQ9JHS4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClpxQ9JHS4 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms