Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Gm11803-201ENSMUST00000119966 444 ntBASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Gm29127-201ENSMUST00000188304 517 ntBASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Gm8598-201ENSMUST00000221184 836 ntBASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Gm14660-201ENSMUST00000119809 575 ntBASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Gm27731-201ENSMUST00000185192 107 ntBASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Gm43630-201ENSMUST00000201550 776 ntBASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.75□□□□□ -0.37
Tubb3Q9ERD7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Daam2-202ENSMUST00000224595 1926 ntBASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Gm5687-201ENSMUST00000118252 640 ntBASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Gm22331-201ENSMUST00000158066 136 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms