Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Gm38002-201ENSMUST00000193255 180 ntBASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rtp4Q9ER80 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Gm8805-201ENSMUST00000117848 313 ntBASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.03□□□□□ -0.48
Rtp4Q9ER80 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Thoc7-209ENSMUST00000225325 765 ntBASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Snora73a-201ENSMUST00000082453 205 ntBASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rtp4Q9ER80 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rtp4Q9ER80 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.02□□□□□ -0.48
Rtp4Q9ER80 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rtp4Q9ER80 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rtp4Q9ER80 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rtp4Q9ER80 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rtp4Q9ER80 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.02□□□□□ -0.48
Rtp4Q9ER80 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.02□□□□□ -0.48
Rtp4Q9ER80 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rtp4Q9ER80 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rtp4Q9ER80 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rtp4Q9ER80 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.02□□□□□ -0.48
Rtp4Q9ER80 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Gm26927-201ENSMUST00000182385 965 ntBASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Gm44069-201ENSMUST00000204898 506 ntBASIC12.02□□□□□ -0.49
Rtp4Q9ER80 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms