Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Gm7029-201ENSMUST00000173226 450 ntBASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Gm27892-201ENSMUST00000185017 106 ntBASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Gm5035-201ENSMUST00000215581 927 ntBASIC13.35□□□□□ -0.27
Cpne8Q9DC53 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Gm32025-201ENSMUST00000217960 307 ntBASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Gm5356-201ENSMUST00000093326 615 ntBASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne8Q9DC53 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Gm22331-201ENSMUST00000158066 136 ntBASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Gm17208-201ENSMUST00000168388 535 ntBASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Gm22121-201ENSMUST00000175148 54 ntBASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Gm27331-201ENSMUST00000183705 60 ntBASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpne8Q9DC53 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpne8Q9DC53 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpne8Q9DC53 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpne8Q9DC53 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpne8Q9DC53 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Mir1894-201ENSMUST00000122802 81 ntBASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.33□□□□□ -0.28
Cpne8Q9DC53 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpne8Q9DC53 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms