Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdc40Q9DC48 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Mir686-201ENSMUST00000102174 109 ntBASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Gm11618-201ENSMUST00000117946 267 ntBASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Gm27514-201ENSMUST00000183692 110 ntBASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Gm37008-201ENSMUST00000195712 319 ntBASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.94□□□□□ -0.5
Cdc40Q9DC48 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.94□□□□□ -0.5
Cdc40Q9DC48 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Gm10268-201ENSMUST00000085340 555 ntBASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdc40Q9DC48 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Mir1247-201ENSMUST00000116706 82 ntBASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Gm27682-201ENSMUST00000183930 110 ntBASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Gm10146-201ENSMUST00000072739 309 ntBASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdc40Q9DC48 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms