Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm45668-201ENSMUST00000211271 493 ntBASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Gm15823-201ENSMUST00000064305 670 ntBASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp4cQ9D7F7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Gm45053-201ENSMUST00000206112 2499 ntBASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp4cQ9D7F7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Gm12928-201ENSMUST00000117115 573 ntBASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Gm6458-201ENSMUST00000211573 635 ntBASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp4cQ9D7F7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Gm16202-201ENSMUST00000117532 544 ntBASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Gm12138-201ENSMUST00000122180 951 ntBASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms