Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Gm9824-201ENSMUST00000178707 561 ntBASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Mir8117-201ENSMUST00000184773 107 ntBASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Gm19931-201ENSMUST00000198920 368 ntBASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3a3Q9D554 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3a3Q9D554 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Sf3a3Q9D554 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3a3Q9D554 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3a3Q9D554 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3a3Q9D554 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Sf3a3Q9D554 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3a3Q9D554 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3a3Q9D554 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.96□□□□□ -0.34
Sf3a3Q9D554 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Gm24543-201ENSMUST00000103867 82 ntBASIC12.95□□□□□ -0.34
Sf3a3Q9D554 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Gm18889-201ENSMUST00000174284 929 ntBASIC12.95□□□□□ -0.34
Sf3a3Q9D554 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Gm45612-201ENSMUST00000211320 160 ntBASIC12.95□□□□□ -0.34
Sf3a3Q9D554 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.95□□□□□ -0.34
Sf3a3Q9D554 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.95□□□□□ -0.34
Sf3a3Q9D554 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3a3Q9D554 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Gm12403-201ENSMUST00000121384 959 ntBASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms