Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Stag1Q9D3E6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Gm15547-201ENSMUST00000122152 333 ntBASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Gm45186-201ENSMUST00000206874 478 ntBASIC15.28■□□□□ 0.04
Stag1Q9D3E6 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.28■□□□□ 0.04
Stag1Q9D3E6 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Stag1Q9D3E6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Gm15276-201ENSMUST00000145953 498 ntBASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Gm25043-201ENSMUST00000158604 212 ntBASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Mir7070-201ENSMUST00000183657 86 ntBASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 AC113031.8-201ENSMUST00000227856 631 ntBASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Stag1Q9D3E6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stag1Q9D3E6 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stag1Q9D3E6 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stag1Q9D3E6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stag1Q9D3E6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stag1Q9D3E6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Stag1Q9D3E6 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Gm13736-201ENSMUST00000119272 253 ntBASIC15.26■□□□□ 0.03
Stag1Q9D3E6 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 AA914427-201ENSMUST00000193194 1166 ntBASIC15.26■□□□□ 0.03
Stag1Q9D3E6 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Stag1Q9D3E6 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms