Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Gm13689-201ENSMUST00000119360 685 ntBASIC12.72□□□□□ -0.37
Ssu72Q9CY97 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Gm29667-201ENSMUST00000190817 490 ntBASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Gm43514-201ENSMUST00000198852 424 ntBASIC12.72□□□□□ -0.37
Ssu72Q9CY97 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.72□□□□□ -0.37
Ssu72Q9CY97 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Mir339-201ENSMUST00000083659 96 ntBASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Itm2b-204ENSMUST00000228637 783 ntBASIC12.71□□□□□ -0.37
Ssu72Q9CY97 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.71□□□□□ -0.37
Ssu72Q9CY97 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.71□□□□□ -0.38
Ssu72Q9CY97 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ssu72Q9CY97 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ssu72Q9CY97 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
Ssu72Q9CY97 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ssu72Q9CY97 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ssu72Q9CY97 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ssu72Q9CY97 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ssu72Q9CY97 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ssu72Q9CY97 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ssu72Q9CY97 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.7□□□□□ -0.38
Ssu72Q9CY97 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Gm44397-201ENSMUST00000195950 113 ntBASIC12.7□□□□□ -0.38
Ssu72Q9CY97 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Paupar-201ENSMUST00000194826 3482 ntBASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ssu72Q9CY97 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms