Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.07■□□□□ 0
Smc3Q9CW03 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smc3Q9CW03 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smc3Q9CW03 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smc3Q9CW03 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.06■□□□□ 0
Smc3Q9CW03 Gm7488-201ENSMUST00000117148 684 ntBASIC15.06■□□□□ 0
Smc3Q9CW03 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.06■□□□□ 0
Smc3Q9CW03 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.06■□□□□ 0
Smc3Q9CW03 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.06■□□□□ 0
Smc3Q9CW03 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.06■□□□□ 0
Smc3Q9CW03 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Smc3Q9CW03 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Smc3Q9CW03 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smc3Q9CW03 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smc3Q9CW03 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smc3Q9CW03 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Smc3Q9CW03 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Smc3Q9CW03 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Smc3Q9CW03 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.05■□□□□ -0
Smc3Q9CW03 Gm12928-201ENSMUST00000117115 573 ntBASIC15.05■□□□□ -0
Smc3Q9CW03 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.05■□□□□ -0
Smc3Q9CW03 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.05■□□□□ -0
Smc3Q9CW03 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 Gm28693-202ENSMUST00000190758 331 ntBASIC15.05■□□□□ -0
Smc3Q9CW03 Gm2495-201ENSMUST00000191160 466 ntBASIC15.05■□□□□ -0
Smc3Q9CW03 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.05■□□□□ -0
Smc3Q9CW03 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.05■□□□□ -0
Smc3Q9CW03 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.05■□□□□ -0
Smc3Q9CW03 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.05■□□□□ -0
Smc3Q9CW03 Gm15823-201ENSMUST00000064305 670 ntBASIC15.05■□□□□ -0
Smc3Q9CW03 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC15.05■□□□□ -0
Smc3Q9CW03 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.05■□□□□ -0
Smc3Q9CW03 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.05■□□□□ -0
Smc3Q9CW03 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 Gm44758-201ENSMUST00000206096 2068 ntBASIC15.05■□□□□ -0
Smc3Q9CW03 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Smc3Q9CW03 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.05■□□□□ -0
Smc3Q9CW03 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.05■□□□□ -0
Smc3Q9CW03 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.05■□□□□ -0
Smc3Q9CW03 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smc3Q9CW03 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Smc3Q9CW03 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Smc3Q9CW03 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.04■□□□□ -0
Smc3Q9CW03 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smc3Q9CW03 Mir6977-201ENSMUST00000184960 64 ntBASIC15.04■□□□□ -0
Smc3Q9CW03 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.04■□□□□ -0
Smc3Q9CW03 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.04■□□□□ -0
Smc3Q9CW03 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.04■□□□□ -0
Smc3Q9CW03 Nudt18-202ENSMUST00000228554 3619 ntBASIC15.04■□□□□ -0
Smc3Q9CW03 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms