Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Rprl2-201ENSMUST00000157150 290 ntBASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Gm9727-201ENSMUST00000161387 555 ntBASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Gm21470-201ENSMUST00000187680 696 ntBASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RTRAFQ9CQE8 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Gm5425-201ENSMUST00000214125 459 ntBASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
RTRAFQ9CQE8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
RTRAFQ9CQE8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC10.4□□□□□ -0.75
RTRAFQ9CQE8 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.75
RTRAFQ9CQE8 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
RTRAFQ9CQE8 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
RTRAFQ9CQE8 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Daam2-202ENSMUST00000224595 1926 ntBASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.39□□□□□ -0.75
RTRAFQ9CQE8 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms