Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Gm13612-201ENSMUST00000119276 390 ntBASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Gm5626-201ENSMUST00000222151 1058 ntBASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H2afb1Q9CQ70 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Gm8213-201ENSMUST00000118191 441 ntBASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Gm14921-201ENSMUST00000118643 908 ntBASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
H2afb1Q9CQ70 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
H2afb1Q9CQ70 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
H2afb1Q9CQ70 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb1Q9CQ70 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb1Q9CQ70 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb1Q9CQ70 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
H2afb1Q9CQ70 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb1Q9CQ70 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H2afb1Q9CQ70 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms