Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.58□□□□□ -0.56
Krt88Q9CPR6 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.58□□□□□ -0.56
Krt88Q9CPR6 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Krt88Q9CPR6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Krt88Q9CPR6 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms